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Table 1 Comparative distribution of dockerin-containing CAZyme modules in A. cellulolyticus vs. C. thermocellum

From: Genome-wide analysis of Acetivibrio cellulolyticus provides a blueprint of an elaborate cellulosome system

A. Glycoside Hydrolases families

1

2

3

5

8

9

10

11

13

15

16

18

19

23

26

30

39

43

44

48

51

53

59

74

77

81

94

105

116

124

Total

A. cellulolyticus

Genome-wide

2

1

3

16

4

21

4

1

3

1

1

5

2

2

5

3

—

4

1

2

—

1

1

1

1

1

3

1

1

1

92

Dockerin-containing proteins

—

1

—

12

3

19

4

1

—

—

1

—

—

—

4

4

—

4

1

1

—

1

1

1

—

1

—

1

1

1

62

C. thermocellum

Genome-wide

2

1

2

10

1

16

6

1

2

1

2

4

—

2

3

2

1

6

1

2

1

1

—

1

—

1

3

—

—

1

73

Dockerin-containing proteins

—

1

—

8

1

15

3

1

—

—

1

1

—

—

3

2

1

5

1

1

—

1

—

1

—

1

—

—

—

1

48

B. Polysaccharide Lyases families

1

9

11

                            

A. cellulolyticus

Genome-wide

1

1

3

                            

Dockerin-containing proteins

1

1

3

                            

C. thermocellum

Genome-wide

2

1

1

                            

Dockerin-containing proteins

2

1

1

                            

C. Carbohydrate Esterases families

1

2

3

4

6

7

8

9

12

14

                     

A. cellulolyticus

Genome-wide

2

1

3

4

1

—

1

1

7

—

                     

Dockerin-containing proteins

2

1

3

1

1

—

1

—

4 (6)

—

                    

13

C. thermocellum

Genome-wide

3

1

2

3

—

1

1

1

2

1

                    

15

 

Dockerin-containing proteins

3

1

1 (2)

1

—

—

1

—

1 (2)

—

                    

8

  1. Numbers represent proteins which contain one or more modules of the different protein families (glycoside hydrolases, polysaccharide lyases and carbohydrate esterases) as were identified by CAZy. The number of proteins are compared between cellulosomal and non-cellulosomal (genome-wide) proteins. Data are provided for both species. Numbers of modules which appear more than once in the same protein are shown parenthetically.