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Table 3 Comparison of microarray and q-PCR fold-changes for selected transcripts in breast muscle of BJY or AA chickens

From: Identification of differentially expressed genes and pathways for intramuscular fat deposition in pectoralis major tissues of fast-and slow-growing chickens

Breed

Comparison (days)

21 vs 1

42 vs 1

90 vs 1

120 vs 1

Microarray

q-PCR

Microarray

q-PCR

Microarray

q-PCR

Microarray

q-PCR

BJY

FABP3

−5.86

−5.99

−3.56

−5.44

−7.90

−6.51

−2.38

−3.78

RXRA

3.64

2.63

4.11

5.44

5.83

9.38

3.08

6.78

MYL10

−152.02

−20.08

−87.27

−12.47

−291.39

−69.91

−141.24

−33.06

FGF4

4.82

3.66

4.24

4.69

11.43

8.55

6.55

9.99

RBP7

4.89

3.56

9.27

6.42

7.14

9.71

2.47

3.53

ACSF3

−2.40

−2.92

−3.98

−3.26

−4.49

−4.61

−3.86

−3.77

DCK

−2.49

−2.18

−11.36

−7.45

−19.25

−9.19

−44.86

−12.93

DGAT2

5.38

5.59

2.26

3.24

2.20

2.57

2.30

2.69

FABP5

−2.68

−3.11

−3.57

−3.42

−2.97

−3.07

−3.47

−3.78

AA

FABP3

−4.62

−4.56

−4.78

−3.77

−5.01

−7.39

/

/

RXRA

2.86

2.5

4.51

4.79

3.48

3.69

/

/

MYH4

−30.21

−8.48

−50.39

−12.56

−29.66

−13.53

/

/

FGF4

−11.24

−12.54

−9.05

−8.67

−3.60

−4.22

/

/

FABP1

12.81

6.97

5.21

4.33

2.23

3.15

/

/

PGK1

7.44

6.98

8.13

7.82

10.04

9.53

/

/

PLTP

3.62

3.06

2.92

2.45

6.67

4.36

/

/

RBP7

−8.04

−9.41

−12.33

−10.95

−2.50

−3.27

/

/

 

THRSP

−8.45

−7.99

−6.29

−5.46

−35.01

−19.74

/

/

  1. FABP (1, 3, 5), Fatty acid binding protein; RXRA, Retinoid X receptor-alpha; MYL10, Myosin, light chain 10; FGF4, Epidermal growth factor 4; RBP7, Retinol binding protein 7; ACSF3, Acyl-CoA synthetase family member 3; DCK, Deoxycytidine kinase; DGAT2, Diacylglycerol O-acyltransferase homolog 2; MYH4, Myosin, heavy polypeptide 4; PGK1, Phosphoglycerate kinase 1; PLTP, Phospholipid transfer protein; THRSP, Thyroid hormone responsive, SPOT14 homolog; BJY, Beijing-you; AA, Arbor Acres.