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Table 2 Pairwise distances (no. of nucleotide differences) and Standard Errors (SE) for the major groups shown in Figure 1.

From: High resolution clustering of Salmonella enterica serovar Montevideo strains using a next-generation sequencing approach

 

Schwarzengrund

Javiana

Pomona

Clade I

Clade II

Clade III

Clade IV

Schwarzengrund

23 (2.9)

      

Javiana

25700 ( 70)

NA

     

Pomona

27600 (130)

17800 ( 73)

NA

    

Clade I

32500 ( 85)

23700 ( 92)

22700 (120)

NA

   

Clade II

33000 ( 98)

27100 (110)

25900 ( 73)

17600 (120)

499 (8.5)

  

Clade III

32800 (130)

26100 ( 59)

27700 (110)

18400 ( 78)

22200 ( 44)

2718 ( 43)

 

Clade IV

34300 (150)

26500 (110)

24600 (150)

19300 (170)

23800 (130)

19300 (130)

13.5 (2.0)

  1. Distances were calculated using the concatenated alignment of 63,987 informative SNPs that estimates the diversity between S. Schwarzendgrund, S. Javiana, S. Pomona and the major clades of S. Montevideo observed.