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Figure 9 | BMC Genomics

Figure 9

From: Quantitative RNA-Seq analysis in non-model species: assessing transcriptome assemblies as a scaffold and the utility of evolutionary divergent genomic reference species

Figure 9

Quantiative gene expression results comparing results from direct mapping vs. using a Mouse proxy. Comparison of expression levels (log2) between genes identified via BLASTn of TA contigs and the H. sapiens CCDS dataset (Y-axis), and genes identified first via BLASTx of TA contigs and the Mouse dataset, and then BLASTp RBH of Mouse dataset and the Human dataset (X-axis). Each point represents a CCDS gene. Points above line of unity include genes that lose contigs through no hit in the Mouse dataset.

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BMC Genomics

ISSN: 1471-2164

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