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Table 1  An. gambiae  RNA-seq Expression Data

From: Translational regulation of Anopheles gambiae mRNAs in the midgut during Plasmodium falciparum infection

 

Infected Non-polysomal

Infected Polysomal

Uninfected Non-polysomal

Uninfected Polysomal

Uninfected Total RNA

Infected Total RNA

Total Reads Set 1

7785361

4244042

4781123

4766035

2081115

6150051

Total Reads Set 2

3871849

3442387

3351084

2203276

9837495

4328298

Total Reads Set 3

6597022

6980908

8588835

5980648

3009585

8407264

Reads Mapped to Transcriptome Set 1

3527074 (45.3%)

3423900 (80.7%)

3608010 (75.5%)

1049208 (22.0%)

1483831 (71.3%)

5144550 (83.7%)

Reads Mapped to Transcriptome Set 2

2332634 (60.2%)

1476806 (42.9%)

2557909 (76.3%)

473146 (21.5%)

7772228 (79.0%)

2612416 (60.4%)

Reads Mapped to Transcriptome Set 3

4942339 (74.9%)

5191081 (74.4%)

7221237 (84.1%)

4992710 (83.5%)

2634845 (71.3%)

5992586 (71.3%)

  1. Sequence reads are listed for three independent experiments (Sets 1–3). The six samples were multiplexed and sequenced together. Each set had roughly 30 million raw reads. Erroneous reads and reads where linkers were incomplete or missing were excluded from total number of reads. Reads mapped to transcriptome are the number (and percentage) of reads which matched back to the An. gambiae cDNA P3.4 database.