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Table 1 Summary of 454 sequencing data before and after trimming between two normalized cDNA treated with and without BAL

From: Development of a porcine (Sus scofa) embryo-specific microarray: array annotation and validation

Batch ID

# of Raw sequences

# of high quality sequences

Library ID

Description

PVT0101

49,385

14,186

PVT01

In vitro 454 library (2009)

PVT0102

45,491

20,316

PVT01

IN vitro 454 library (2009)

PVT201

113,399

86,481

PVT02

IN vitro 454 library (2010)

PVV0101

57,208

25,611

PVV01

In vitro 454 library (2009)

PVT0102

25,732

13,428

PVV01

In vitro 454 library (2009)

PVT0201

96,787

73,548

PVV02

In vitro 454 library (2010)

Sub Total

388,002

233,570

  

PVT0301

103,807

84,146

PVT03

IN vitro BAL-treated 454 library (2010)

PVT0302

253,539

215,845

PVT03

In vitro BAL-treated 454 library (2010)

PVT0303

241,363

205,195

PVT03

In vitro BAL-treated 454 library (2010)

PVV0301

93,020

73,307

PVV03

In vitro BAL-treated 454 library (2010)

PVV0302

438,114

308,218

PVV03

In vitro BAL-treated 454 library (2010)

Sub Total

1,129,843

886,720

  
  1. Library ID with 01–02 and 03 represent cDNAs without and with BAL treatment respectively.