Table 1 Summary of data cleaning produced by small RNA sequencing (perfect and imperfect flower buds)
Type | Perfect | Imperfect | ||
|---|---|---|---|---|
Count | Percent (%) | Count | Percent (%) | |
Total reads | 22,561,972 | Â | 24,952,690 | Â |
High quality | 22,135,703 | 100% | 24,466,679 | 100% |
3′ adapter null | 53,592 | 0.24% | 49,464 | 0.20% |
Insert null | 6,598 | 0.03% | 8,281 | 0.03% |
5′ adapter contaminants | 36,203 | 0.16% | 58,925 | 0.24% |
Smaller than 18nt | 48,147 | 0.22% | 107,094 | 0.44% |
Poly(A) | 6,110 | 0.03% | 3,583 | 0.01% |