Figure 8

Best prediction performance with all features. A) ROC-score for each TF classifier using the SVM model with all features (SVM), with peak height only (Height), and with peak height, phyloP conservation and PWM score (HPP), after 10-fold stratified cross-validation on the dataset consisting of K562 and HeLa-S3 peaks. B) ROC-score after 10-fold stratified cross-validation when training classifiers on K562 and HeLa-S3 peaks, and then testing for overlap with peaks from a third cell type, GM12878.