Comparative analysis of the Oenococcus oeni pan genome reveals genetic diversity in industrially-relevant pathways

Table 3 Strain-dependent differences in amino acid genes

Amino acid	Enzyme	Pan_genome number	Strain(s) affected
L-threonine	homoserine kinase	2510	AWRIB304
	2.7.1.39		PSU-1
L-glutamine	L-glutamate synthetase	1612	AWRIB202
	6.3.1.2
L-methionine	Aspartate kinase	2507	AWRIB304
	2.7.2.4		AWRIB422
			AWRIB548
	O-succinylhomoserine (thiol)-lyase	1350	PSU-1
	2.5.1.48		AWRIB129
			AWRIB202
			AWRIB304
			AWRIB419
			AWRIB422
			AWRIB429
			AWRIB553
			AWRIB568
			AWRIB576
	Methionine synthase II	1895	BAA-1163
	2.1.1.14		AWRIB202
			AWRIB304
			AWRIB318
			AWRIB422
			AWRIB429
			AWRIB548
			AWRIB568
			AWRIB576
L-leucine	3-isopropylmalate dehydrogenase	2716	PSU-1
	1.1.1.85		AWRIB129
			AWRIB202
			AWRIB304
			AWRIB318
			AWRIB419
			AWRIB422
			AWRIB429
			AWRIB548
			AWRIB553
			AWRIB568
			AWRIB576

ISSN: 1471-2164