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Table 1 List of selected candidate functional genes related to the formation of the phenotype of QS

From: Comparative transcript profiling of gene expression between seedless Ponkan mandarin and its seedy wild type during floral organ development by suppression subtractive hybridization and cDNA microarray

GenBank accsession no.

EMI a

Description b

e-Value c

Clones d

Up-regulated

    

JU497309

B9SST7

Male sterility protein

2E-77

7

JU497311

B9S7V4

STS14 protein

6E-23

3

JU497315

Q5CD81

(E)-beta-ocimene synthase

1E-120

2

JU497324

B9RXQ0

Tryptophan synthase beta chain

6E-91

2

JU497327

B9RT81

Multidrug resistance pump

5E-50

3

JU497333

B9S7Q2

Zinc finger protein

1E-67

3

JU497348

A9ZN18

Geranyl-diphosphate synthase

3E-11

5

JU497417

B9R726

Xylem serine proteinase 1

7E-24

1

JU497359

B9SCQ9

Oxidoreductase

2E-36

1

JU497418

A1ECJ7

Putative miraculin-like protein 2

7E-24

1

JU497422

A9XCN2

Putative DNA binding protein

2E-24

1

JU497389

B9I523

Multidrug resistance protein ABC transporter family

1E-121

2

JU497397

B9SIR0

S-locus-specific glycoprotein

2E-45

1

JU497403

B9S0U2

Stomatin-1, putative

1E-07

1

Down-regulated

    

JU497308

B9S7Q1

Zinc finger protein

1E-140

2

JU497318

B9S1E9

Transcription factor AtMYC2

4E-20

2

JU497321

B2VQE0

Methionine synthase

1E-107

4

JU497323

P42802

Inositol-3-phosphate synthase

1E-112

4

JU497331

B9SR02

Multicopper oxidase

6E-78

2

JU497332

B3RGD7

CBF/DREB-like transcription factor

6E-44

4

JU497336

B9RRA4

Cysteine protease

2E-25

2

JU497338

Q8VWL8

Beta-mannosidase

6E-64

2

JU497342

O82547

Chitinase CHI1

8E-28

7

JU497343

O49817

Late embryogenesis abundant protein

2E-22

2

JU497344

B9SI15

Ubiquitin-protein ligase

2E-54

2

JU497351

A9PLA1

AP2/ERF domain-containing transcription factor

2E-46

1

JU497352

B9T724

GATA transcription factor

4E-62

1

JU497353

B9RZK6

Protein COBRA

4E-82

1

JU497354

A2IB54

Mitogen-activated protein kinase

4E-85

1

JU497356

B9RST2

Glutamine synthetase plant

3E-71

1

JU497357

Q3KN68

Isoflavone reductase-like protein 5

2E-56

1

JU497361

B9SQM6

Transcription factor

3E-34

1

JU497362

Q9FT21

Putative glutathione S-transferase T3

2E-07

1

JU497364

B9GWH5

Glutathione peroxidase (Fragment)

2E-25

1

JU497367

B9RN18

Peptidyl-prolyl cis-trans isomerase

3E-54

1

JU497368

B9R762

R2R3-myb transcription factor

1E-69

1

JU497369

O82547

Chitinase CHI1

8E-28

1

JU497419

P83948

Pectinesterase-3

1E-46

1

JU497372

B9NBQ9

AP2/ERF domain-containing transcription factor

1E-108

1

JU497373

Q9ZRC9

ACC oxidase

6E-36

1

JU497421

A5YWA9

NAC domain protein

1E-51

1

JU497378

Q7Y066

Plasma membrane H+-ATPase

1E-114

1

JU497423

B9RIP3

Hevamine-A

1E-22

1

JU497424

B9T0Z2

ADP/ATP carrier protein

1E-06

1

JU497427

Q84U94

Chlorophyll a/b-binding protein (Fragment)

2E-14

1

JU497388

A7XUL4

dehydration-responsive element binding protein

1E-14

1

JU497391

Q4F6Y8

Putative AP2-binding protein

6E-15

1

JU497398

Q6EV47

Non-specific lipid-transfer protein (Fragment)

1E-45

1

JU497401

B9SJL5

Amine oxidase

1E-57

1

JU497405

B9S925

Zinc finger protein

3E-88

1

JU497406

B9T868

Putative peroxidase C3 (Fragment)

8E-26

1

JU497434

Q8H2A1

Caffeoyl CoA O-methyltransferase (Fragment)

3E-11

1

JU497412

B9HGW6

Glutaredoxin

6E-20

1

JU497413

B9R762

R2R3-myb transcription factor

3E-21

1

  1. a The EMI codes of the most similar genes to the EST sequences.
  2. b The description of sequences based on Uniprot database.
  3. c The best e-value from a BLASTx search for corresponding EST sequences.
  4. d The number of sequenced clones in the libraries.