From: The role of Transposable Elements in shaping the combinatorial interaction of Transcription Factors
 | CM | CM only | E2T | E2T only | int | CM | CM only | E2T | E2T only | int |
---|---|---|---|---|---|---|---|---|---|---|
ALR/Alpha | 3.39 | 4.56 | -2.32 | -2 | -1.63 | 19 | 19 | 0 | 0 | 0 |
HAL1-2a_MD | -1.73 | -0.9 | 2.06 | 4.61 | -1.84 | 1 | 1 | 10 | 10 | 0 |
L1PBa | 2.46 | 5.42 | -2.33 | -2.12 | -1.24 | 15 | 13 | 2 | 0 | 2 |
L2b | 4.54 | 5.01 | 3.18 | 2.76 | 1.02 | 284 | 149 | 292 | 157 | 135 |
LSU-rRNA_Hsa | 26.31 | 11.67 | 31.65 | 16.3 | 21.52 | 17 | 5 | 21 | 9 | 12 |
LTR16A | 4.31 | 1.17 | 4.1 | 1.51 | 4.39 | 30 | 9 | 32 | 11 | 21 |
LTR19A | 24.31 | 17.77 | 17.83 | 8.8 | 17.7 | 22 | 10 | 17 | 5 | 12 |
LTR3 | 26.63 | 9.93 | 27.34 | 9.12 | 25.12 | 12 | 3 | 12 | 3 | 9 |
LTR33 | 5.14 | 3.2 | 2.04 | -0.53 | 3.79 | 42 | 18 | 31 | 7 | 24 |
LTR3A | 38.69 | 29.61 | 21.24 | 4.95 | 21.92 | 25 | 14 | 14 | 3 | 11 |
LTR40a | 8.77 | 8.45 | 6.38 | 4.28 | 6.19 | 20 | 10 | 17 | 7 | 10 |
LTR47A | 6.12 | -0.1 | 10.88 | 6.51 | 8.63 | 10 | 2 | 17 | 9 | 8 |
LTR8 | 12.3 | 15.3 | 2.68 | 1.24 | 3.02 | 52 | 38 | 22 | 8 | 14 |
MER11A | 1.87 | 6.17 | -1.71 | -0.89 | -1.8 | 8 | 8 | 1 | 1 | 0 |
MER20 | 2.84 | 0.51 | 3.6 | 2.71 | 2.91 | 52 | 20 | 59 | 27 | 32 |
MER21A | 3.21 | 4.28 | 0.95 | 1.78 | 0.5 | 13 | 9 | 9 | 5 | 4 |
MER31A | 9.47 | 5.65 | 6.36 | 0.97 | 9.56 | 20 | 7 | 16 | 3 | 13 |
MER39 | 4.67 | 1.74 | 9.96 | 8.59 | 5.65 | 18 | 4 | 33 | 19 | 14 |
MER39B | 5.28 | 0.93 | 7.14 | 4.31 | 6.69 | 11 | 2 | 15 | 6 | 9 |
MER41A | 14.46 | 6.04 | 14.16 | 5.75 | 15.04 | 52 | 15 | 52 | 15 | 37 |
MER41B | 18.63 | 8.54 | 14.97 | 5.84 | 16.22 | 63 | 23 | 56 | 16 | 40 |
MER49 | 10.95 | 1.98 | 11.85 | 2.15 | 15.15 | 26 | 3 | 29 | 6 | 23 |
MER4A | 4.12 | 2.47 | 6.85 | 7.26 | 3.65 | 10 | 4 | 15 | 9 | 6 |
MER4A1 | 3.9 | 0.32 | 5.87 | 5.09 | 3.96 | 15 | 5 | 21 | 11 | 10 |
MER4B | -0.89 | -1.52 | 3.75 | 5.06 | 0.12 | 6 | 1 | 21 | 16 | 5 |
MER4D | 7.58 | 1.72 | 8.2 | 1.84 | 9.92 | 19 | 3 | 22 | 6 | 16 |
MER50 | 4.9 | 5.86 | 2.42 | 2.29 | 1.73 | 21 | 13 | 16 | 8 | 8 |
MER52A | 3.07 | 5.93 | -0.35 | 0.09 | -0.61 | 16 | 13 | 7 | 4 | 3 |
MER77 | 6.43 | 5.66 | 3.74 | 1.84 | 3.7 | 22 | 12 | 17 | 7 | 10 |
MER81 | -0.59 | -1.26 | 5.19 | 5.96 | 0.81 | 5 | 0 | 21 | 16 | 5 |
MER87 | 17.46 | 9.3 | 16.67 | 7.78 | 13.82 | 15 | 6 | 14 | 5 | 9 |
MER91A | 3.99 | 4.67 | 2.59 | 1.18 | 2.24 | 17 | 9 | 15 | 7 | 8 |
MIR3 | 4.01 | -0.03 | 5.81 | 3.11 | 5.23 | 172 | 55 | 214 | 97 | 117 |
MIRb | 2.76 | 1.19 | 6.57 | 5.45 | 3.43 | 488 | 190 | 625 | 327 | 298 |
MIRc | 3.05 | 2.04 | 5.89 | 5.56 | 2.66 | 233 | 95 | 304 | 166 | 138 |
MLT2B1 | 2.31 | 3.06 | 0.84 | -0.23 | 0.98 | 15 | 8 | 12 | 5 | 7 |
MLT2B4 | 4.02 | 1.67 | 4.87 | 2.45 | 3.99 | 21 | 7 | 25 | 11 | 14 |
MamRep605 | 1.97 | 0.59 | 3.73 | 2.61 | 2.24 | 13 | 4 | 19 | 10 | 9 |
Plat_L3 | 2.64 | 3.61 | 1.34 | 1.29 | 0.62 | 13 | 8 | 11 | 6 | 5 |
LTR/ERV1 | 12.77 | 5.84 | 10.86 | 4.04 | 11.55 | 592 | 227 | 604 | 239 | 365 |
LTR/ERVK | 7.7 | 7.32 | 1.52 | -0.95 | 3.15 | 77 | 45 | 47 | 15 | 32 |
LTR/ERVL | 8.98 | 5.6 | 5.65 | 1.37 | 6.83 | 415 | 177 | 395 | 157 | 238 |
LTR/Gypsy? | 3.01 | 2.49 | 2.55 | 0.5 | 2.76 | 24 | 9 | 24 | 9 | 15 |
SINE/MIR | 2.56 | 0.97 | 8.02 | 7.33 | 3.02 | 1170 | 480 | 1486 | 796 | 690 |
Satellite/centr | 3.51 | 5.22 | -2.71 | -2.19 | -1.89 | 23 | 23 | 0 | 0 | 0 |
rRNA | 14.31 | 9.74 | 19.99 | 17.64 | 12.42 | 23 | 9 | 33 | 19 | 14 |