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Table 1 Common carp miRNA clusters

From: Identification of common carp (Cyprinus carpio) microRNAs and microRNA-related SNPs

Cluster

Members

Gene family

Locations

Strand

Cluster length(bp)

Zebrafish genomic region

1

miR-212,

mir-132

CYC023A01I23/2:200-591*

-

392

chr15: 25232199- 25232621

 

miR-132

     

2

miR-430b-2

mir-430

CYC084B02N10/1:362-723

-

362

chr4: 28007374- 28007937

 

miR-430c-2

     

3

miR-430b-1

mir-430

utg7180000000224:174-688**

+

515

chr4: 28012479- 28013329

 

miR-430a,

     
 

miR-430c-1

     

4

miR-430a,

mir-430

utg7180000000234:306-1206

+

901

chr4: 28001389-28010326

 

miR-430c-1

     
 

miR-430b-1

     

5

miR-7,

 

utg7180000001602:502-775

-

274

chr5:56984908- 56985224*

 

s0021

     
  1. *:“CYC” presents unassembled BESs.
  2. **: “utg” presents assembled BESs.