Skip to main content

Table 2 Primers used for real-time RT-PCR

From: Serpins in rice: protein sequence analysis, phylogeny and gene expression during development

Primer

Sequence

Amplicon size (bp)

OsSRP-QKG fwd

5′-ACATGCGGAAGCTGGGCGTGA-3′

167

 rvs

5′-TTGCATCATAACCACGGCGGTG-3′

 

OsSRP-LGC fwd

5′-ACAAGACGAACGCGGCGGAGAC-3′

133

rvs

5′-TGGTAGACGGCCGACACGACGA-3′

 

OsSRP-LRS fwd

5′-ACGCGGCAAGTTACTGTCGGGC-3′

228

 rvs

5′-TGCAGCAGCAGCCTCAGTCCC-3′

 

OsSRP-FRS fwd

5′-GGCTGCGAAGCTGAACTCTGAAC-3′

197

 rvs

5′-TCTCTGGAGAACCCACCATCCCA-3′

 

OsSRP-PTY fwd

5′-AGCGAGCAGGAAGTCTCCCCG-3′

155

 rvs

5′-GGCGGCGTGTTCACACTCACA-3′

 

OsSRP-PLP fwd

5′-CCTCCGGGAAGCTGAATTCTCTG-3′

220

rvs

5′-TACTGTTCCAGAGACCTCCTCCC-3′

 

OsSRP-FAS fwd

5′-TCAAGCCGTTCGTGGCGGACC-3′

170

 rvs

5′-CGCCGCCGATGCGAAGGTAAG-3′

 

OsSRP-FLC fwd

5′-AAGATGGCAGTGGCGTCGTCCG-3′

303

 rvs

5′-CTTCATCGTGCAGGCCGTGG-3′

 
  1. BLASTN searches against the rice genome using the primers as query sequences were performed to check for the possibility of non-specific hybridisation. fwd = forward; rvs = reverse.fwd = forward; rvs = reverse.