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Table 3 Ten PCD and disease-resistance related non-cold-responsive genes with constitutively higher transcription levels in K354

From: Genome-wide gene expression profiling of introgressed indica rice alleles associated with seedling cold tolerance improvement in a japonica rice background

Gene ID

Annotation

Fold Change [K354] vs [C418]

  

Control

2 h

6 h

12 h

24 h

48 h

LOC_Os11g37759

stripe rust resistance protein Yr10, putative, expressed

27.0

32.7

19.4

15.7

15.6

17.6

LOC_Os11g12340

disease resistance protein RPM1, putative, expressed

194.9

164.2

162.5

132.6

63.3

55.7

LOC_Os11g39320

LZ-NBS-LRR class, putative, expressed

19.2

19.3

11.0

9.9

9.2

8.0

LOC_Os06g15730

Disease resistance protein family protein.

15.9

14.0

11.6

11.2

10.9

16.6

LOC_Os11g39310

NB-ARC domain containing protein, expressed

18.8

19.9

13.4

12.6

10.5

15.2

LOC_Os11g39190

NB-ARC domain containing protein, putative, expressed

36.2

34.8

22.8

18.0

19.5

15.8

LOC_Os02g18070

NB-ARC domain containing protein, expressed

7.2

9.9

9.5

12.4

5.9

7.5

LOC_Os07g33730

NB-ARC domain containing protein, expressed

10.9

7.7

8.4

10.5

7.8

8.4

LOC_Os02g16270

xa1, putative, expressed

19.8

18.9

14.6

8.3

6.7

6.7

LOC_Os11g12000

NBS-LRR disease resistance protein, putative, expressed

26.3

19.5

20.0

20.6

24.3

39.0