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Table 3 Pearson correlation coefficients (95% confidence intervals) of different iHS statistics with regression coefficients from association study for protein yield.

From: Combining evidence of selection with association analysis increases power to detect regions influencing complex traits in dairy cattle

Method

SNPs with MAF < 10%

 

all SNPs

 
 

all (N= 4,387)

top 1% |iHS| (N = 42)

all (N = 34,851)

top 1% |iHS| (N = 349)

top 0.1% |iHS| (N = 35)

iHS

0.045

0.197

0.091

0.466

0.559

 

(0.016-0.074)

(-0.105-0.467)

(0.080-0.101)

(0.380-0.544)

(0.277-0.751)

iHSVoight [9]

0.005

0.21

-0.005

0.002

0.228

 

(-0.025-0.034)

(-0.092-0.31)

(-0.0158-0005)

(-0.107-0.102)

(-0.114-0.521)

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BMC Genomics

ISSN: 1471-2164

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