Skip to main content

Table 2 Effects of sequencing depth on FPR at different n and depths

From: Efficient experimental design and analysis strategies for the detection of differential expression using RNA-Sequencing

Depth

n = 2

n = 3

n = 4

n = 6

n = 8

n = 12

25%

0.02

0.02

0.04

0.03

0.03

0.03

50%

0.03

0.03

0.04

0.05

0.04

0.03

75%

0.04

0.06

0.05

0.07

0.04

0.04

100%

0.04

0.06

0.06

0.06

0.05

0.04

  1. Effects of sequencing depth on FPR values for a subset of our tested depths = 25%, 50%, 75% & 100%.