Skip to main content

Table 1 A list of up-regulated transcripts in resistant IET8585 as compared to susceptible IR24 one hour after inoculation with Bxo43

From: Xanthomonas oryzae pv oryzae triggers immediate transcriptomic modulations in rice

Functional Category

Gene Name

Fold change

q-value

Gene Description

Cell Signaling

AK068504

2.497697

0.036

Similar to Receptor-like protein kinase.

 

AK111766

2.126773

0.023

Similar to LysM domain-containing receptor-like kinase 3.

 

AK071585

3.051916

0.021

Serine/threonine protein kinase domain containing protein.

 

AK068725

2.730174

0.029

Mitogen activated protein kinase kinase kinase 3 domain containing protein.

 

AK100561

2.068673

0.036

Similar to Protein phosphatase 2C gamma isoform (EC 3.1.3.16) (PP2C-gamma) (Protein phosphatase magnesium-dependent 1 gamma) (Protein phosphatase 1C) (Fibroblast growth factor inducible protein 13) (FIN13).

 

AK070889

2.007305

0.017

Similar to Calmodulin-like protein.

 

AK110372

2.442006

0.015

Calmodulin binding protein-like family protein (Os12g0556500).

 

AK111852

2.789168

0.017

Similar to EF-hand Ca2+-binding protein CCD1.(Os06g0683400)

Transcription Factor

AK105817

2.030093

0.017

Similar to MYB transcription factor R2R3 type.

 

AK099506

2.210962

0.022

Similar to Transcription factor MYC7E (Fragment).

 

AK068232

3.077906

0.174

AUX/IAA protein family protein.

 

AK073848

2.138125

0.017

Similar to NAC domain protein.

 

AK062422

7.448169

0.017

Dehydration-responsive element-binding protein 1B.

 

AK111606

3.783378

0.044

WRKY transcription factor 69.

 

AK073812

2.587758

0.017

APETALA2 (AP2) gene 59., Abiotic stress., AP2/ERF family protein.

Defense related

AK069420

14.04906

0.020

NB-ARC domain containing protein.

 

AK100906

4.244798

0.019

Similar to Diacylglycerol kinase.

 

AK099489

2.399005

0.048

Similar to Glutathione S-transferase GST 23 (EC 2.5.1.18) (Fragment).

 

AK063796

3.123453

0.173

Similar to Glutathione S-transferase GST 8 (EC 2.5.1.18).

 

AK071599

2.625772

0.225

Similar to Cytochrome P450 71A1 (EC 1.14.-.-) (CYPLXXIA1) (ARP-2).

 

AK064764

2.834801

0.047

Cytochrome P450 family protein.

 

AK107349

3.065706

0.047

Similar to Cytochrome P450 monooxygenase CYP72A5 (Fragment).

 

AK104472

6.697833

0.017

Similar to flavanoid 3-monoxygenase

 

AK099355

4.241933

0.017

Similar to Chitinase (EC 3.2.1.14) (Fragment).

 

AK100973

8.113719

0.019

Acidic class III chitinase OsChib3a precursor (Chitinase) (EC 3.2.1.14).

 

AK068115

6.352779

0.017

Harpin-induced 1 domain containing protein.

 

AK108457

3.262299

0.183

Harpin-induced 1 domain containing protein.

 

AK066825

10.15681

0.017

Similar to Lipoxygenase, chloroplast precursor (EC 1.13.11.12).

Stress

AK061337

10.75691

0.100

Similar to Flavanone 3-hydroxylase-like protein

 

AK069823

2.294991

0.050

Similar to DnaJ homolog subfamily B member 1 (Heat shock 40 kDa protein 1) (Heat shock protein 40) (HSP40) (DnaJ protein homolog 1) (HDJ-1).

 

AK068268

3.10078

0.026

Similar to Protein disulfide isomerase (Fragment).

Transport

AK066194

4.009016

0.017

Similar to High-affinity potassium transporter.

 

AK100411

3.405603

0.050

Ammonium transporter.

 

AK064899

3.501921

0.050

Similar to Peptide transporter PTR2-B (Histidine transporting protein).

 

AK099079

3.654256

0.019

Similar to Monosaccharide transporter 3.

 

AK073216

4.20715

0.017

Similar to Sorbitol transporter.

 

AK069583

2.063748

0.017

Similar to PDI-like protein.

Metabolic

AK061884

3.698292

0.017

Similar to Nucellin-like aspartic protease (Fragment).

 

AK066720

2.718419

0.017

Lipase, class 3 family protein.

 

AK070038

4.264953

0.018

Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein ATL8).

 

AK071972

3.545375

0.017

Similar to Short-chain dehydrogenase Tic32.

 

AK100909

3.13932

0.017

Similar to 1-deoxy-D-xylulose 5-phosphate synthase 2 precursor.

 

AK059608

2.516794

0.209

Similar to Nuclease I.

 

AK061438

3.693648

0.178

Ribonuclease T2 family protein.

 

AK071652

2.787926

0.039

Beta 5 subunit of 20S proteasome.

Structural

AK103678

2.167948

0.017

Ribosomal protein S8e domain containing protein.

 

AK068395

2.523953

0.017

Actin/actin-like family protein.

 

AK107269

3.393664

0.035

Ribosomal protein S14, conserved site domain containing protein.

Miscellaneous

AK107102

3.477243

0.155

Similar to F-box/LRR-repeat MAX2 homolog.