Table 2 The detailed results of our testing on the Phalaenopsis ESTs data with different parameters
From: An efficient RNA interference screening strategy for gene functional analysis
Parameters | d T  = 3,d N  = 5,L = 21 | d T  = 4,d N  = 5,L = 21 | d T  = 4,d N  = 6,L = 21 |
|---|---|---|---|
Number of enumerated subsequences | 191,087 | 191,087 | 191,087 |
Number of subsequences (after Far_neighbor and powerful subsequence examination) | 173,106 | 188,889 | 117,203 |
Number of qualified siRNAs | 100,890 | 106,188 | 6,443 |
Number of non-redundant qualified siRNAs | 487 | 2,147 | 352 |
Average number of target genes of a qualified siRNA | 1.0583 | 1.1163 | 1.0852 |
Number of qualified siRNAs (number of target gene > 1) | 5,565 | 10,863 | 491 |
Average number of target genes of qualified siRNAs (number of target gene > 1) | 2.0577 | 2.1370 | 2.1181 |
Number of selected siRNAs in first round analysis | 142 | 94 | 162 |
Number of candidate-genes examined in first round analysis | 229 | 229 | 227 |
Average examination frequency of each candidate-gene | 1.153 | 1.170 | 1.110 |