Figure 4
From: Transcriptome-scale homoeolog-specific transcript assemblies of bread wheat
Sequence similarity of assembled contigs compared to those of the OM sequence set. Similarities between homoeologs from the OM set (Panel A) are all between 87 and 99%, while similarities between a small set of genes not classified as homoeologs in Ogihara et al. [25] and Mochida et al. [18] exhibit a somewhat smaller sequence identity. Sequence similarities between assembled contigs (Panel B) were quantified from an all-vs-all BlastN search (E-value < 10-50, alignment length >400 bp). A sharp rise at a %ID at around 93% is clearly visible. Note that a maximum of one Blast hit per sequence pair has been retained in order to produce this plot.