Table 1 Chief features of inversion breakpoint regions in D. mojavensis
Inv | Breakpoints and adjacent protein-coding genes in D. mojavensis | TE copies at co-occurrent breakpoints | Inversion-associated inverted duplications | Preexisting duplications in parental genome | Transposition-associated genes and D. virilis lineage specific genes (underlined) | Gene gains (bold) and putative position effects | |
|---|---|---|---|---|---|---|---|
2c | AC | Ligatin-GstD1a | Â | Â | Â | Â | Â |
| Â | BuT5 | Â | GstD1a-GstD1b | Â | GstD1a GstD1b | Â | Â |
| Â | BD | Slbp-GstD1b | Â | Â | Â | Â | Â |
2f | AC | αTub84B-Pli |  |  |  |  |  |
|  |  |  |  | Lsp1β |  |  |  |
|  | BD | CG1091-Lsp1β |  |  |  |  |  |
2g | AC | Dmoj\GI22722-CG4511 | Â | Â | Â | Â | Â |
| Â | Â | Â | Â | Dmoj\GI22722 CG32344 CG2846 Dvir\GJ23779 | Â | Â | Â |
| Â | BD | CG32344-spas | Â | Â | Â | Â | Â |
2h | AC | pasha-ppk20 | Â | Â | Â | Â | Â |
| Â | Â | 7.1 kb from AB | ppk20-ppk21 | Dmoj\GI24456 | Dmoj\GI23123 | Â | Â |
| Â | BD | Â | Â | Â | Â | Â | Â |
2q | AC | Spargel-CG1213 | Â | Â | Â | Â | Â |
| Â | Â | 1 kb from AB 4.3 kb from CD | CG1213-CG1208 | Â | Dmoj\GI22075 | Â | Â |
| Â | BD | CG31528-CG1208 | Â | Â | Â | Â | Â |
2r | AC | Hsp68a-Hel89B | Â | Â | Â | Â | Â |
| Â | Galileo | Â | Hsp68a-Hsp68b | Histone clusters | Hsp68a Hsp68b | Â | Â |
| Â | BD | Hsp68b-Cad99C | Â | Â | Â | Â | Â |
2s | AC | CG9801-CG10214 | Â | Â | Â | Â | Â |
| Â | Â | BuT5 | Â | Â | CG10375 | Â | Â |
| Â | BD | CG34135-CG10375 | Â | Â | Â | Â | Â |