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Table 3 Population genetic differentiation among 14 pig breeds using 96 SNP markers

From: Development of a genetic tool for product regulation in the diverse British pig breed market

 

Breed

BK

BS

DU

GLS

HA

LR

LB

LW

MA

MS

MW

PI

TA

W

FST

1

Berkshire

              

0.51 (0.10)

2

British Saddleback

0.29

             

0.39 (0.08)

3

Duroc

0.42

0.36

            

0.53 (0.08)

4

Gloucestershire Old Spots

0.47

0.43

0.56

           

0.62 (0.12)

5

Hampshire

0.51

0.45

0.60

0.75

          

0.64 (0.10)

6

Landrace

0.52

0.32

0.44

0.64

0.63

         

0.45 (0.19)

7

Large Black

0.39

0.23

0.50

0.43

0.56

0.53

        

0.50 (0.11)

8

Large White

0.56

0.35

0.50

0.67

0.60

0.19

0.55

       

0.46 (0.18)

9

Mangalica

0.51

0.40

0.57

0.68

0.63

0.53

0.52

0.50

      

0.58 (0.10)

10

Meishan

0.65

0.55

0.69

0.71

0.82

0.71

0.57

0.71

0.78

     

0.71 (0.08)

11

Middle White

0.64

0.45

0.60

0.75

0.69

0.36

0.61

0.22

0.63

0.78

    

0.56 (0.16)

12

Pietrain

0.63

0.46

0.59

0.77

0.71

0.30

0.64

0.33

0.63

0.81

0.47

   

0.57 (0.18)

13

Tamworth

0.45

0.43

0.53

0.61

0.66

0.62

0.45

0.64

0.64

0.75

0.70

0.74

  

0.61 (0.11)

14

Welsh

0.55

0.37

0.48

0.67

0.65

0.10

0.57

0.23

0.56

0.73

0.43

0.33

0.65

 

0.49 (0.19)

  1. The lower diagonal contains the pairwise genetic differentiation between breeds estimated using Weir & Cockerham’s FST[22]. The column on the far-right of the table presents the average breed FST and the standard deviation.