Table 4 SSR repeat description in lily and tulip
From: Generation and analysis of expressed sequence tags in the extreme large genomes Lilium and Tulipa
SSR motif | Nr. contigs | Total Nr. SSR* | di-** | Tri-** | Tetra- | Penta- | Hexa- |
|---|---|---|---|---|---|---|---|
Connecticut King | 14,773 | 271 (1.9%) | 85 (31%) | 161 (59%) | 4 | 6 | 15 |
White Fox | 21,898 | 603 (2.8%) | 216 (36%) | 301 (50%) | 51 | 12 | 23 |
Star Gazer | 24,700 | 735 (3%) | 299 (41%) | 330 (45%) | 66 | 13 | 27 |
Trumpet | 26,075 | 745 (2.8%) | 312 (42%) | 341 (46%) | 50 | 17 | 25 |
Cantata | 17,646 | 696 (3.9%) | 168 (24%) | 449 (65%) | 30 | 9 | 40 |
Princeps | 17,007 | 683 (4%) | 146 (21%) | 468 (69%) | 28 | 11 | 30 |
T. fosteriana | 24,713 | 957 (3.9%) | 216 (23%) | 642 (67%) | 45 | 15 | 39 |
Kees Nelis | 38,716 | 881 (2.3%) | 262 (30%) | 491 (56%) | 58 | 19 | 51 |
Ile de France | 24,557 | 521 (2%) | 140 (27%) | 317 (61%) | 33 | 12 | 19 |
Bellona | 14,325 | 302 (2%) | 80 (28%) | 184 (64%) | 9 | 11 | 18 |
T. gesneriana | 54,575 | 1,302 (2.9%) | 393 (30%) | 719 (55%) | 95 | 35 | 60 |