Table 1 Length distribution of assembled contigs, scaffolds and Unigenes
Nucleotide length (bp) | Contigs | Scaffolds | Unigenes |
|---|---|---|---|
75-100 | 68000 | 425 | 0 |
101-200 | 63846 | 46435 | 21289 |
201-300 | 29886 | 24243 | 24376 |
301-400 | 12723 | 10954 | 10941 |
401-500 | 7061 | 6508 | 6463 |
501-600 | 4368 | 4226 | 4242 |
601-700 | 3013 | 3010 | 2987 |
701-800 | 2138 | 2137 | 2150 |
801-900 | 1500 | 1650 | 1627 |
901-1000 | 1270 | 1434 | 1431 |
1001-1100 | 1010 | 1108 | 1105 |
1101-1200 | 870 | 965 | 959 |
1201-1300 | 691 | 781 | 786 |
1301-1400 | 598 | 788 | 783 |
1401-1500 | 469 | 584 | 584 |
1501-1600 | 362 | 481 | 468 |
1601-1700 | 312 | 457 | 471 |
1701-1800 | 237 | 360 | 360 |
1801-1900 | 213 | 329 | 332 |
1901-2000 | 185 | 307 | 302 |
2001-2100 | 148 | 254 | 254 |
2101-2200 | 114 | 195 | 197 |
2201-2300 | 102 | 194 | 187 |
2301-2400 | 72 | 157 | 159 |
2401-2500 | 68 | 143 | 144 |
2501-2600 | 46 | 100 | 93 |
2601-2700 | 49 | 91 | 91 |
2701-2800 | 29 | 70 | 73 |
2801-2900 | 29 | 69 | 66 |
2901-3000 | 23 | 42 | 41 |
>3000 | 92 | 289 | 287 |
Total | 199,524 | 108,786 | 83,248 |
Minimum length (bp) | 75 | 100 | 150 |
Maximum length (bp) | 5144 | 5144 | 5144 |
Average length (bp) | 235 | 375 | 449 |
Total nucleotide length (bp) | 46,788,615 | 40,835,227 | 37,402,485 |