Trait | Analysis | Variable | SNP Location | Estimate | t | P-value | |
---|---|---|---|---|---|---|---|
 |  | Intercept | -- | 2009.79 | 55.49 | <0.0001 | |
ST3 | Sex Average | 3L _651118 | Gale (u3) | −290.43 | −5.56 | <0.0001 | |
 | r2 = 0.666 | 3R _18209173 | CG31169 (cds) | 209.42 | −5.78 | <0.0001 | |
 |  | Intercept | -- | 237.31 | 44.29 | <0.0001 | |
ST4 | Sex Average | 3R _16981874 | SNF4Agamma (in) | −15.71 | −5.08 | <0.0001 | |
 | r2 = 0.686 | 2R _3529122 | CG43340 (#) | 18.15 | 5.84 | <0.0001 | |
 |  | Intercept | -- | 2.693 | 124.52 | <0.0001 | |
P:O ratio | Sex Average | 2L _18554474 | Pde11(in) | 0.046 | 3.71 | 0.0007 | |
 | r2 = 0.744 | 3L _2682962 | CG12187(in) | −0.070 | −5.12 | <0.0001 | |
 |  | 3L _9640097 | fry(in) | −0.053 | −3.90 | 0.0004 | |
B | |||||||
Trait | Analysis | Source of Variation | df a | MS b | F | P -value | σ 2 c |
 |  | Haplotype | 3 | 13648093 | 24.3 | <0.0001 | 144977 |
ST3 | Sex Average | Line (Haplotype) | 36 | 577585 | 1.9 | 0.0014 | 19080 |
 |  | Error | 535 | 302190 | -- | -- | 302038 |
 |  | Haplotype | 3 | 127247 | 22.4 | <0.0001 | 677.3 |
ST4 | Sex Average | Line (Haplotype) | 36 | 5689 | 1.3 | 0.1430 | 84.7 |
 |  | Error | 535 | 4498 | -- | -- | 4495.6 |
 |  | Haplotype | 6 | 1.26 | 21.8 | <0.0001 | 15.0 |
P:O ratio* | Sex Average | Line (Haplotype) | 33 | 0.06 | 0.9 | 0.6922 | 0.0 |
 |  | Error | 505 | 0.07 | -- | -- | 67.0 |