Table 3 Most highly expressed transcripts in the fast oil accumulation stage (S2) of Sacha Inchi seed development
From: Transcriptome analysis of Sacha Inchi (Plukenetia volubilis L.) seeds at two developmental stages
GeneID | Gene product | Length | S1 Initial stage (RPKM) | S2 Fast stage (RPKM) |
|---|---|---|---|---|
Unigene49263 | Ricin-agglutinin family protein | 266 | 25 | 248413 |
Unigene40641 | Preproricin | 625 | 12 | 150901 |
Unigene40632 | Preproricin | 575 | 15 | 147593 |
Unigene51295 | Unknown | 307 | 167 | 5432 |
Unigene55818 | Oleosin | 715 | 13 | 4193 |
Unigene45984 | 1-cys peroxiredoxin | 227 | 2 | 3015 |
Unigene17787 | Microsomal omega-3 fatty acid desaturase | 1118 | 11 | 2918 |
Unigene37706 | BURP domain-containing protein | 658 | 22 | 2549 |
Unigene45545 | Predicted protein | 222 | 24 | 2467 |
Unigene30721 | Lipid transfer protein (LTP) family protein | 325 | 87 | 2116 |
Unigene24053 | Ricin-agglutinin family protein | 492 | 79 | 2011 |
Unigene45119 | Lipid transfer protein (LTP) family protein | 217 | 121 | 1877 |
Unigene59025 | Peroxidase | 270 | 736 | 1740 |
Unigene54781 | Glutamyl-tRNA(Gln) amidotransferase subunit A | 497 | 108 | 1722 |
Unigene49902 | Seed maturation protein PM35 | 276 | 4 | 1625 |
Unigene24688 | 60S ribosomal protein | 442 | 709 | 1499 |
Unigene46988 | Protein disulfide-isomerase | 238 | 260 | 1482 |
Unigene30559 | Thaumatin-like protein | 425 | 120 | 1356 |
Unigene52866 | Protein disulfide-isomerase | 360 | 295 | 1330 |
Unigene20119 | Thiazole biosynthetic enzyme | 632 | 87 | 1305 |
Unigene52919 | Protein disulfide-isomerase | 362 | 278 | 1302 |
Unigene42819 | Conserved hypothetical protein | 641 | 3 | 1295 |
Unigene49237 | Major latex allergen Hev b | 266 | 125 | 1273 |
Unigene40227 | Syringolide-induced protein | 761 | 5 | 1218 |
Unigene54197 | Endoplasmic reticulum 18:2 desaturase | 442 | 4 | 1149 |
Unigene5950 | Amidase family protein | 842 | 75 | 1146 |
Unigene54389 | Aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A | 457 | 73 | 1139 |
Unigene15265 | DNA binding | 1294 | 13 | 1078 |
Unigene49312 | Unknown | 267 | 101 | 1046 |
Unigene53121 | Thaumatin-like protein | 372 | 94 | 1035 |
Unigene46454 | Lipid transfer protein (LTP) family protein | 232 | 69 | 1015 |
Unigene35810 | Extensin like protein | 218 | 4 | 1014 |