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Table 4 The pre-miRNAs whose arm selection preferences are not consistent with miRBase annotation

From: miRNA arm selection and isomiR distribution in gastric cancer

pre-miRNA

Location

N5p

N3p

T5p

T3p

MAmiExch

hsa-mir-1277

3p:47-68

354

172

201

56

N;T

hsa-mir-376a-2

3p:50-70

428

14

99

54

N;T

hsa-mir-495

3p:50-71

35

19

12

5

N;T

hsa-mir-1303

3p:52-73

19

73

12

10

T

hsa-mir-1306

3p:55-72

94

0

31

0

N;T

hsa-mir-496

3p:56-77

27

0

50

0

N;T

hsa-mir-561

3p:61-82

231

0

40

0

N;T

hsa-mir-659

3p:61-82

123

0

56

0

N;T

hsa-mir-376b

3p:62-83

106

9

32

83

N

hsa-mir-1307

3p:80-101

3512

2369

2002

3544

N

hsa-mir-1273c

5p:10-31

0

53

0

50

N;T

hsa-mir-511-1

5p:16-36

39

903

53

147

N;T

hsa-mir-511-2

5p:16-36

39

903

53

147

N;T

hsa-mir-1247

5p:40-61

67

237

17

41

N;T

hsa-mir-374a

MA:12-33;mi:42-63

2275

36122

2017

35147

N;T

hsa-mir-500a

MA:13-35;mi:52-73

215

1907

72

1834

N;T

hsa-mir-625

MA:15-35;mi:52-73

333

576

87

206

N;T

hsa-mir-136

MA:15-37;mi:49-70

1328

621

530

652

T

hsa-mir-664

mi:11-34;MA:49-71

913

271

398

98

N;T

hsa-mir-144

mi:15-36;MA:52-71

12406

441

1209

113

N;T

hsa-mir-493

mi:16-37;MA:57-78

254

248

1744

727

N;T

hsa-mir-376a-1

mi:7-28;MA:44-64

1646

14

569

54

N;T

  1. N and T symbols in "MAmiExch" column represent the normal and tumor library in which such major and minor arm exchange event was observed.