Table 4 Time usage for each step of miRNA and target identifications on TAIR10 cDNA dataset with varied number of threads running
From: C-mii: a tool for plant miRNA and target identification
| Â | 1 thread | 2 threads | 4 threads |
|---|---|---|---|
miRNA identification steps | Â | Â | Â |
Homolog search | 2:40:31 | 1:56:20 | 1:34:31 |
Primary miRNA folding | 1:39:08 | 0:55:15 | 0:34:31 |
Precursor miRNA folding | 0:18:24 | 0:22:10 | 0:17:40 |
Target identification steps | Â | Â | Â |
Target scanning | 0:22:23 | 0:20:10 | 0:19:22 |
miRA-target folding | 0:22:24 | 0:14:15 | 0:14:39 |
Target annotation | 0:29:19 | 0:16:09 | 0:10:15 |