Figure 2

The abstracted view of the ATTED-II dataset with 22,447 nodes and 189,546 edges. The rounded squares are clusters and the hexagon is a gene that is not contained in any cluster. Because the gene AT5G59560 has no connections with any genes in this network, it appears as an unconnected node. The numbers shown above the clusters represent the number of nodes within the clusters, and the labels following the numbers are the abbreviated GO terms that get the highest score and thus best describe the properties of the clusters. Meta-edges are drawn as blue lines between any two clusters that have at least one edge between at least one member in each of the two clusters, with the numbers next to the meta-edges representing the total numbers of all edges existing between the members of the two clusters. The total numbers are also reflected by the thicknesses of the meta-edges.