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Table 3 List of well-documented pathway cross-talks

From: Discovering pathway cross-talks based on functional relations between pathways

Pathway ID 1

Pathway ID 2

FBA

PEBA

PMID

erbb2erbb3pathway

vegfr1_2_pathway

0.86

SOP

19029832

fgf_pathway

erbb1_receptor_proximal_pathway

0.86

SOP

21045207

s1p_s1p1_pathway

vegfr1_2_pathway

0.78

SOP

20555359

s1p_s1p3_pathway

erbb1_receptor_proximal_pathway

0.78

SOP

20555359

fgf_pathway

pdgfrapathway

0.76

SOP

21045207

wnt_beta_catenin_pathway

vegfr1_2_pathway

0.73

NA

19806668

vegfr1_2_pathway

mapktrkpathway

0.71

SIP

18852899

fgf_pathway

mapktrkpathway

0.70

SIP

21045207

fgf_pathway

et_egfrpathway

0.68

SOP

21045207

vegfr1_pathway

et_egfrpathway

0.67

SIP

19357226

s1p_s1p1_pathway

pdgfrbpathway

0.67

SOP

20555359

fgf_pathway

pi3kciaktpathway

0.64

NA

21045207

erbb_network_pathway

et_egfrpathway

0.63

SOP

19223981

vegfr1_2_pathway

tgfbrpathway

0.60

SOP

19180561

hedgehog_2pathway

wnt_beta_catenin_pathway

0.60

NA

20085802

notch_pathway

hedgehog_2pathway

0.59

NA

17317139

cxcr4_pathway

et_egfrpathway

0.58

SIP

17601710

tcr_pathway

reg_gr_pathway

0.57

NA

8888490

hedgehog_2pathway

fgf_pathway

0.50

NA

20085802

hedgehog_2pathway

tgfbrpathway

0.50

NA

20085802

notch_pathway

vegfr1_2_pathway

0.50

NA

19273260

fgf_pathway

reg_gr_pathway

0.45*

SOP

21045207

notch_pathway

wnt_canonical_pathway

0.23*

NA

17317139

notch_pathway

tgfbrpathway

0.20*

NA

17317139

  1. NA indicates this pathway pair is not identified by PEBA.
  2. * indicates the value is less than cut-off value (funSim = 0.5).