Table 1 Numbers of transcripts that are either up- or down-regulated during the mycoparasitic response of T. reesei , T. atroviride and T. virens
From: Comparative transcriptomics reveals different strategies of Trichodermamycoparasitism
Species | Section | Genes | Transcripts | Proteins | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
With identified function | Unknown | Orphan | ||||||||
Total | Up/down (%*) | Total | Up/down (%) | Total | Up/down (%) | Total | Up/down (%) | |||
T. reesei | Longibrachiatum | 9 143 | 424 | 36.6/63.4 | 264 | 44.7/55.3 | 137 | 23.4/76.6 | 23 | 21.7/78.3 |
T. atroviride | Trichoderma | 11 865 | 651 | 53.1/46.9 | 432 | 52.1/47.9 | 173 | 58.4/41.6 | 46 | 43.5/56.5 |
T. virens | Pachybasium | 12 428 | 303 | 15.5/84.5 | 211 | 19.4/80.6 | 71 | 8.5/91.5 | 21 | 0/100 |