Table 1 Validation of micro-array data by RNA deep sequencing analysis
Gene | Sample | Micro-array | RNA deep sequencing | ||
|---|---|---|---|---|---|
Fold change | P-value | Fold change | P-value | ||
atf3 | S. epidermidis versus non-injected (5DPI) | + 2.83 | 2.49E-09 | + 4.77 | 1.83E-44 |
cxcl-c1c | S. epidermidis versus non-injected (5DPI) | + 5.77 | 1.77E-14 | + 6.74 | 4.07E-25 |
HPX (1 of 2) | S. epidermidis versus non-injected (5DPI) | + 10.10 | 1.60E-11 | + 6.00 | 1.13E-51 |
il1b | S. epidermidis versus non-injected (5DPI) | + 11.94 | 1.22E-10 | + 8.54 | 9.97E-38 |
lect2l | S. epidermidis versus non-injected (5DPI) | + 6.99 | 1.80E-20 | + 3.12 | 1.17E-21 |
mfap4 (4 of 13) | S. epidermidis versus non-injected (5DPI) | + 21.27 | 4.15E-41 | + 3.67 | 4.30E-09 |
mmp9 | S. epidermidis versus non-injected (5DPI) | + 5.18 | 9.73E-20 | + 10.71 | 1.54E-95 |
mmp13a | S. epidermidis versus non-injected (5DPI) | + 7.35 | 1.07E-18 | + 15.30 | 6.03E-82 |