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Table 5 Gene characteristics in the groups analyzed

From: Translational signatures and mRNA levels are highly correlated in human stably expressed genes

Grp

3’ UTR size*

CDS size*

tAi +

dG*

mRNA*

GO: Tr&RibSy

1

981(842,1107)a

987(906,1028)a

0.367(0.36-0.37)a

−11.6(-12.4,-11.3)a

743(627,891)a

27.8% a

2

801(663,935)b

790(654,943)b

0.371(0.37-0.30)b

−10.9(-12.1,-10.9)b

3026(1891,4935)b

50.6% b

3

717(513,856)b

612(498,726)b

0.377(0.37-0.38)c

- 10.1(-11.3,-8.6)b

8212(5123,9010)c

69.0% c

4

1071(934,1226)a

1491(1356,1575)c

0.367(0.365-0.369)a

−12.0(-12.1,-10.8)a

 

18.0% d

  1. * median (95% Confidence interval)l,+ mean:95% (Confidence interval), Grp Group, dG refers to minimum-free-energy of mRNA structure formed by 50 bases of 5′ UTR, GO Tr&RibSy refers to the % of genes belonging to the pool of genes that belong to translation or ribosome synthesis categories. Different letters (a, b, c, d) represent statistically significant differences (p < 0.05) among values in the same column. Differences in GO: Tr&RibSy were determined using chi-squared test for proportions with Yates’ correction.
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BMC Genomics

ISSN: 1471-2164

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