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Table 13 Maternal effect genes

From: Unscrambling butterfly oogenesis

abstrakt (abs)

Y

jafrac1; thioredoxin peroxidase 1; thiol peroxiredoxin (jafrac1; dpx-4783)

Y

terribly reduced optic lobes; perlecan; zeste-white 1 (trol; pcan; zw1)

Y

deadhead; thioredoxin (trx-1; trx)

N

TBC1 domain family member 1; weakly similar to Drosophila melanogaster pollux (plx)

Y

thioredoxin-like; similar to Bombyx mori thioredoxin (trxl)

Y

out at first (oaf)

Y

thioredoxin-2; similar to Bombyx mori thioredoxin-like (trx2)

Y

extra macrochaetae (emc)

Y

yema gene 2.8 (yemg2.8)

N

wings up a; troponin 1 (tn1; tpn1; wupa)

Y

yema gene 3.4 (yemg3.4)

N

troponin c (tpnc; tnc47d)

Y

yema gene 3a (yemg3a)

N

troponin t; wings up b; upheld (tpnt; wupb)

Y

yema gene 3b (yemg3b)

N

tropomyosin 1 or 2 (tm1; tm2)

Y

yema gene 3c (yemg3c)

N

alcohol dehydrogenase (adh)

Y

yema gene 4 (yemg4)

N

polar granule component (pgc)

N

yema gene 9.5 (yemg9.5)

N

type III alcohol dehydrogenase; iron-containing dehydrogenase (t3dh; adhfe1)

Y

yemanuclein α; similar to ubinuclein (yemalpha)

Y

plutonium (plu)

N

wings down; pourquoi-pas; serendipity-cognate (pqp; wdn; sry-h1)

Y

pan gu (png)

N

serendipity delta; serendipity δ (sry-delta)

Y

giant nuclei (gnu)

N

serendipity α (sry-alpha)

Y

germ cell guidance factor wunen; phosphatidate phosphatase (wun)

Y

heat shock RNA ω (hsr-omega)

N

receptor for activated protein kinase c rack 1 (rack1)

Y

tiovivo; nebbish; kinesin-like protein at 38b (klp38b; tio; neb)

N

shuttle craft; transcriptional repressor nf-x1 (stc)

Y

GTP-binding protein alpha-subunit; G protein α 73b (Galpha73b)

N

muscleblind (mbl)

Y

Guanine nucleotide-binding protein G(I) subunit (GalphaI)

N

grainyhead (NTF-1; grh)

Y

G protein β-subunit 13f; heterotrimeric guanine nucleotide-binding protein beta subunit (Bombyx mori) (Gbeta13f)

Y

dorsal (Drosophila); embryonic polarity protein dorsal (Bombyx - 2 isoforms) (dl)

Y

G protein γ 1; CG8261 (Ggamma1; bro4 )

Y

dorsal switch protein (dsp1; ssrp2)

Y

protein tyrosine phosphatase 69d (ptp69d)

N

tosca; exonuclease 1 (tos)

Y

similar to serine/threonine kinase pelle; homologous to irak-4 (pll)

Y

Darkener of apricot; dual specificity protein kinase clk2 (Doa)

Y

gastrulation-defective (gd)

Y

clipper; cleavage and polyadenylation specific factor 4 (clp; cpsf30)

Y

short gastrulation (sog )

N

vrille (vri; jf23)

Y

tube (tub)

Y

absent md neurons and olfactory sensilla (amos)

N

similar to Bombyx mori spätzle 1 (spz)

Y

baboon; activin receptor type 1 (ATR1)

Y

weckle (wek)

N

eyelid; osa (eld; osa)

Y

cactus (cact)

Y

gonadal (gdl)

Y

BzArgOEtase (Bombyx mori); similar to easter; clip-domain serine protease subfamily B (ea)

Y

éclair; transmembrane emp24 protein transport domain containing 9 (eca)

Y

similar to snake (Drosophila melanogaster); similar to serine protease 21 (Manduca sexta); clip-domain serine protease subfamily c (snk)

Y

baiser; transmembrane trafficking protein (bai)

Y

toll (tl)

N

logjam (loj)

Y

similar to Bombyx mori calpain; weakly similar to Drosophila melanogaster Calpain-A (CalpA)

Y

bancal; (similar to) heterogeneous nuclear ribonucleoprotein K (hrb57A; q18)

Y

similar to brokenheart; similar to G protein oalpha 47A; Guanine nucleotide-binding protein G(o) subunit alpha; G protein alpha subunit go (G-olpha47A)

Y

maternal transcript 89BA (mat89BA)

N

concertina; Guanine nucleotide-binding protein subunit alpha-13 (conc)

N

asunder; maternal transcript 89BB (mat89BB; asun)

Y

SNF1A/AMP-activated protein kinase - alpha subunit (SNF1-AMPK-alpha subunit)

Y

diadenosine tetraphosphatase; similar to bis(5-nucleosyl)-tetraphosphatase (datp)

Y

SNF1A/AMP-activated protein kinase - beta subunit (SNF1-AMPK-beta subunit)

Y

dopa decarboxylase; aromatic-l-amino-acid decarboxylase (ddc)

Y

SNF1A/AMP-activated protein kinase - gamma subunit (SNF1-AMPK-gamma subunit)

Y

hairless (h)

N

IGF-II mRNA-binding protein (imp; MRE11)

Y

suppressor of hairless; j kappa-recombination signal-binding protein (su(h))

Y

similar to G protein alpha q; G protein α49b (Gαq; Galpha49b)

Y

transcription termination factor lodestar; horka (horka; ids)

Y

map kinase activated protein-kinase-2 (mk2; MAPK-ak2)

Y

raspberry; inosine monophosphate dehydrogenase (ras)

Y

ptb-associated splicing factor; weakly similar to Drosophila no on or off transient a (psf)

Y

misato (mst; lb20)

Y

palmitoyl-protein thioesterase 1 (ppt1)

Y

peanut; similar to septin 7 (pnut)

Y

abl tyrosine kinase (abl)

Y

septin 1; innocent bystander (sep-1; iby)

Y

Abelson interacting protein (Abi)

Y

septin 2 (sep-2)

Y

wing blister; homologous to laminin alpha 2 (merosin) (wb)

N

septin and tuftelin interacting protein; elongator complex protein 2; septin interacting protein 1 (stip)

Y

supervillin; CG33232 (svil)

Y

kurz; similar to ATP-dependent RNA helicase dhx37 (kz)

Y

cyclope; cytochrome c oxidase subunit vic (cype)

Y

pebble (pbl)

Y

la autoantigen-like (la)

Y

numb (numb; nb)

Y

tramtrack (ttk; ttk69)

Y

catalase (cat)

Y

high mobility group protein b1; dorsal switch protein 1 (HMGb1; dsp1; ssrp2)

Y

superoxide dismutase (sod1; csod; cu/znsod)

Y

zinc finger protein 43c (az2)

N

disc proliferation abnormal (mcm4; dpa)

Y

maverick (mav)

N

Fragile x mental retardation 1 (Fmr1)

Y

shibire; dynamin (shi; dyn)

Y

female sterile (2) ketel; karyopherin beta 1; importin β (ketel; imp-beta)

Y

protein o-fucosyltransferase 1; similar to Bombyx mori fut12 gene (pofut1)

Y

karyopherin beta 3 (karyβ3)

Y

protein o-fucosyltransferase 2; similar to Bombyx mori fut13 gene (pofut2)

Y

cas/cse1 segregation protein; export karyopherin cas/cse1p (cas)

Y

similar to bloated tubules; sodium/chloride dependent transporter (blot)

Y

importin alpha 1; karyopherin α1 (imp alpha 1)

Y

gastrulation defective protein 1 homolog; CG5543; similar to WD repeat-containing 70 protein (CG5543)

Y

importin alpha 2; karyopherin α2; pendulin (imp alpha 2)

Y

high mobility group protein 20a (HMG20a)

Y

importin alpha 3; karyopherin α3 (imp alpha 3)

Y

high mobility group box-containing protein 4; hmg-box protein hmg2l1 (HMGx4)

Y

imaginal disc growth factor 1 (idgf; idgf1)

Y

calcium atpase at 60a; sarcoplasmic/endoplasmic reticulum calcium atpase (serca; kum; dserca; cap60a)

Y

imaginal disc growth factor 2 (idgf2)

N

dacapo (chakra; dap)

N

imaginal disc growth factor 3 (idgf3)

N

liprin-α (liprin-a)

N

imaginal disc growth factor 4 (idgf4)

N

mitochondrial acyl carrier protein 1; nadh-ubiquinone oxidoreductase acyl carrier protein (mtacp1)

N

kinesin-like protein at 61f; urchin; kinesin-like protein klp2 (in Bombyx mori) (klp61f; klp2)

Y

mitochondrial assembly regulatory factor; mitofusin (marf; mfn; mfn2)

Y

puromycin sensitive aminopeptidase (psa)

Y

ripped pocket; gonad-specific amiloride-sensitive sodium channel 1 (rpk; gnac1)

N

cask ortholog; calmodulin-dependent kinase (caki; cmg; camguk)

Y

kurtz; similar to beta-arrestin 1 (krz)

Y

signal transducing adaptor molecule (stam)

Y

ubiquitin carboxy-terminal hydrolase; CG4265 (uch)

Y

histone acetyltransferase kat2b; histone acetyltransferase pcaf; general control of amino acid synthesis protein 5-like 2 (pcaf; gcn5)

Y

lark (lark)

Y

ada2b (ada2b)

Y

semaphorin-5c (sema-5c)

N

s-adenosyl-methyl transferase mraw; CG14683 (mraw)

Y

semaphorin 1b (sema-1b )

N

c-terminal binding protein; hairy-interacting protein; similar to 2-hydroxyacid dehydrogenase (ctbp)

Y

selenophosphate synthetase 1; selenide, water dikinase (sps1 )

Y

reticulated (ret)

N

sodium/potassium exchanging and transporting ATPase subunit beta 1 nervana 1 (nrv1)

Y

furin 1; similar to convertase subtilisin/kexin; similar to furin-like convetase (fur1 )

N

sodium/potassium exchanging and transporting ATPase subunit beta 2 nervana 2 (nrv2)

Y

windbeutel; thioredoxin-like motif containing gene (wbl)

Y

  
  1. Maternal transcripts; Maternal effect genes identified mainly from the Drosophila melanogaster literature encoding various types of proteins, including enzymes, needed for early embryogenesis and germ cell formation. Presence (Y) or absence (N) of orthologous transcripts in the Pararge aegeria transcriptome is indicated.