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Table 3 Duplicate retention coefficients

From: Predicting whole genome protein interaction networks from primary sequence data in model and non-model organisms using ENTS

WGD

Intercept

log(DC)

DN

log(DC):DN

P. trichocarpa Salicoid

-1.90193 ***

-0.24628 ***

4.91163 ***

0.57953 ***

A. thaliana α

-1.98648 ***

-0.09509 ***

5.73056 ***

0.69114 ***

A. thaliana β/γ

-2.49904 ***

-0.03628

6.93515 ***

0.72433 ***

  1. Estimated coefficients and significance for the logistic regressions on WGD retention in P. trichocarpa and A. thaliana using network properties degree centrality (DC) and duplicated neighbors (DN) from the ENTS 0.65 confidence networks. P-values are based on confidence intervals generated from fitting the model on resampled data 10,000 times.
  2. *p < 0.05; **p < 0.01; ***p < 0.001.