Roche 454 sequencing | Illumina sequencing | ||
---|---|---|---|
Total number of clean bases | 1,338,668,195 | Total number of bases | 67,321,337 |
Number of fully assembled reads | 8,283,907 | Number of clean reads | 13,930,835 |
Number of contigs | 162,704 | Number of contigs | 568,658 |
Average contig size | 256.95 | Average contig size | 133.25 |
Range of contig length | 100 – 3,413 | Range of contig length | 50 – 2,976 |
454 and Illumina co-assembly results | |||
Number of starting input sequences | 285,780 | ||
Number of sequences kept after clean-up | 213,296 | ||
Number of final assemblies | 165,062 | ||
Number of gene hits with e-value ≤ 10-4 | 31,160 | ||
Number of sequences with matches to Homo sapiens | 27,505 | ||
Number of sequences with matches to Danio rerio | 31,420 |