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Table 1 Pathway annotation to KEGG

From: Analysis of sea-island cotton and upland cotton in response to Verticillium dahliaeinfection by RNA sequencing

ID

Pathway

No. of unigenes (28395)

1

Metabolic pathways

5912 (20.82%)

2

Biosynthesis of secondary metabolites

2959 (10.42%)

3

Plant hormone signal transduction

2243 (7.9%)

4

Plant-pathogen interaction

2238 (7.88%)

5

RNA transport

1102 (3.88%)

6

Spliceosome

915 (3.22%)

7

Ribosome biogenesis in eukaryotes

907 (3.19%)

8

RNA degradation

818 (2.88%)

9

Protein processing in endoplasmic reticulum

791 (2.79%)

10

Purine metabolism

732 (2.58%)

11

Endocytosis

715 (2.52%)

12

Glycerophospholipid metabolism

666 (2.35%)

13

mRNA surveillance pathway

654 (2.3%)

14

Starch and sucrose metabolism

596 (2.1%)

15

Ribosome

574 (2.02%)

16

Ubiquitin mediated proteolysis

512 (1.8%)

17

Phenylpropanoid biosynthesis

467 (1.64%)

18

Ether lipid metabolism

455 (1.6%)

19

Pyrimidine metabolism

387 (1.36%)

20

Circadian rhythm - plant

384 (1.35%)

21

Amino sugar and nucleotide sugar metabolism

359 (1.26%)

22

Phagosome

357 (1.26%)

23

Peroxisome

355 (1.25%)

24

Stilbenoid, diarylheptanoid and gingerol biosynthesis

346 (1.22%)

25

Flavonoid biosynthesis

342 (1.2%)

26

Oxidative phosphorylation

341 (1.2%)

27

Glycolysis/Gluconeogenesis

320 (1.13%)

28

Limonene and pinene degradation

301 (1.06%)

29

Phosphatidylinositol signaling system

290 (1.02%)

  1. Note: Data only showed the annotation unigenes percent of each pathway more than 1%.