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Table 2 Probe sets encoding components of the photosynthetic apparatus significantly up- or down-regulated in the three alloplasmic lines compared with the corresponding euplasmic line

From: Cytoplasmic genome substitution in wheat affects the nuclear-cytoplasmic cross-talk leading to transcript and metabolite alterations

Probe set ID

Log2 fold change alloplasmic T183 vs. euplasmic Chris

Log2 fold change alloplasmic T195 vs. euplasmic Chris

Log2 fold change alloplasmic TH237 vs. euplasmic T20

Probe set description

TaAffx.6196.1.S1_at

-5.81

-5.65

-5.26

Cytochromeb559 alpha chain; psbE

TaAffx.6196.2.S1_s_at

-5.92

-5.63

-4.96

Cytochromeb559 alpha chain; psbE

TaAffx.48564.2.S1_s_at

  

-7.93

Photosystem II M protein; psbM

Ta.20878.1.S1_at

   

Protein Photosystem II reaction centre X protein (PsbX), putative

Ta.22984.1.S1_x_at

 

-1.07

 

Chlorophyll a/b-binding protein (LHCII

Ta.28496.1.A1_at

  

+2.61

Chlorophyll a/b-binding protein (LHCII

Ta.28496.1.A1_x_a

  

+2.54

Chlorophyll a/b-binding protein (LHCII

Ta.29587.2.S1_x_at

  

+1.33

Chlorophyll a/b-binding protein (LHCII

Ta.29587.3.A1_at

  

+3.23

Chlorophyll a/b-binding protein (LHCII

Ta.30702.1.S1_x_at

  

+1.99

Chlorophyll a/b-binding protein (LHCII

Ta.3249.1.S1_at

  

+3.41

Chlorophyll a/b-binding protein (LHCII

Ta.3249.2.S1_x_at

  

+1.72

Chlorophyll a/b-binding protein (LHCII

Ta.3249.3.A1_at

  

+3.47

Chlorophyll a/b-binding protein (LHCII

Ta.3795.1.S1_x_at

  

+1.13

Chlorophyll a/b-binding protein (LHCII

TaAffx.114127.1.S1_x_at

  

+1.83

Chlorophyll a/b-binding protein (LHCII

Ta.488.1.S1_at

  

+1.50

APX4 (ASCORBATE PEROXIDASE 4)

Ta.488.1.S1_x_at

  

+1.51

APX4 (ASCORBATE PEROXIDASE 4)

Ta.488.2.S1_at

  

+1.67

APX4 (ASCORBATE PEROXIDASE 4)

Ta.488.3.S1_a_at

  

+1.54

APX4 (ASCORBATE PEROXIDASE 4)

Ta.488.3.S1_at

  

+1.48

APX4 (ASCORBATE PEROXIDASE 4)

TaAffx.128757.1.S1_at

  

+1.48

Photosystem II protein D1 precursor

TaAffx.128617.1.S1_x_at

-5,14

-4,65

-4.62

Chloroplast (NAD(P)H dehydrogenase, chain 5

TaAffx.128565.9.S1_at

  

+4.98

Protein ATPase I subunit

Ta.25398.1.S1_at

  

-1.10

ELIP1 (early light-inducible protein); chlorophyll binding

TaAffx.128418.14.A1_at

  

-1.26

ELIP1 (early light-inducible protein); chlorophyll binding

Ta.26997.1.S1_at

  

-1.12

Putative yearly light-inducible protein