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Table 1 The de novo assembly of two M. oryzae field isolates genome

From: Genome comparison of two Magnaporthe oryzae field isolates reveals genome variations and potential virulence effectors

Isolates

70-15

FJ81278

HN19311

Assembly contigs

8

6,290

6,249

Genome size (MB)

39.4

37.3

37.1

GC-content

53.0%

51.3%

51.5%

N50 length (KB)

 

151.7

147.4

Max contig length (KB)

 

676.4

698.2

Repeat elements (MB)

3.60

1.02

1.05

Size of contigs >5Kb (MB)

 

34.78(92.8%)

34.62(93.31%)

Unaligned contigs (MB)

 

1.75

0.83

  1. Reference 70–15 is included for comparison.