Genome comparison of two Magnaporthe oryzae field isolates reveals genome variations and potential virulence effectors

Table 2 Statistics of gene prediction for the two isolates

Isolate	70-15	FJ81278	HN19311
Mapped RNA-Seq reads	-	6,280,625	-
Predicted gene numbers	12,827	10,453	10,256
Average gene length (bp)	2,003.9	2,085.0	1,745.4
Average exons per gene	2.68	2.76	2.73
Gene density (per 10 KB)	3.13	2.73	2.77
3′-UTRs numbers	-	5,824	-
5′-UTRs numbers	-	6,729	-

HN19311 gene prediction was performed ab initio, and FJ81278 gene prediction was assisted by RNA-Seq reads.

ISSN: 1471-2164