Table 2 Commonly identified DEGs at three different developmental stages of the im mutant fibers

Ghi.3408.1.A1_at

5.65

55.57

148.77

At3g22370

Alternative oxidase 1

Abiotic response & respiration

Ghi.659.1.S1_at

21.64

18.08

18.16

At1g74920

Aldehyde dehydrogenase

Abiotic response (salt & water)

GhiAffx.24025.1.S1_at

18.07

27.24

17.44

At4g12560

F-box domain protein

Biotic stress response

Ghi.576.3.A1_x_at

7.97

31.71

14.64

At5g40690

EF-Hand 1

Calcium-binding

Ghi.9252.1.A1_at

5.00

2.65

2.45

At3g24590

Signal peptidase 1

Biotic stress response (virus)

GhiAffx.32033.1.A1_s_at

4.78

2.99

4.28

At1g55790

Unknown function (DUF2431)

Metal ion transport

GhiAffx.3843.1.A1_at

4.53

4.05

4.81

At3g11600

Response to karrikin

Abiotic stress

Ghi.8619.1.A1_at

4.38

2.68

2.43

At4g27220

NB-ARC disease resistance

Biotic stress response

Ghi.9264.2.A1_s_at

3.20

4.88

4.38

At5g64210

Alternative oxidase 2

Respiration

Ghi.3288.2.S1_at

3.19

5.05

4.45

At5g07990

Cytochrome P450 protein

Abiotic stress response

Ghi.3591.1.A1_s_at

3.19

3.98

2.84

At1g65820

Glutathione s-transferase

Transport

Ghi.8369.3.A1_at

2.15

2.16

2.48

At2g35510

SRO1, similar to RCD one 1

Abiotic stress response

Gra.778.1.A1_s_at

0.43

0.35

0.48

At4g32250

Protein kinase

Senescence

Ghi.4198.4.S1_s_at

0.43

0.37

0.36

At2g40010

Ribosomal protein L10

Protein synthesis

GhiAffx.22316.1.S1_at

0.39

0.28

0.46

At5g55160

Small ubiquitin-like modifier 2

Abiotic stress response

GhiAffx.59002.1.S1_at

0.36

0.07

0.24

At1g19530

Involve in anaerobic respiration

Respiration

GhiAffx.43892.1.A1_at

0.30

0.39

0.22

At5g39790

5′-AMP-activated protein kinase

Carbohydrate metabolism

Ghi.7402.1.S1_at

0.14

0.29

0.39

At5g25460

Unknown function (DUF642)

Abiotic stress response

GhiAffx.2217.1.S1_at

0.06

0.14

0.11

At2g43360

BIO2, BIOB, Radical SAM protein

Zinc binding & meristem growth