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Table 2 Sub-genome specific amino acid motifs

From: Quantitative and qualitative differences in celiac disease epitopes among durum wheat varieties identified through deep RNA-amplicon sequencing

Sub-genome specific motifs

Sub-genome

n

Motif of two amino acids, ‘YS’

A

118

PQLPYL, PPQLPYP, LPQLPYP, QLPYPQPQPFPP

B

42

PQPQLPYPQ

D

4

PQPQLPYPQ + B sub-genome motif

D/B

2

No specific motif detected

Not assigned

5

 

Total

171

  1. Amino acid motifs in alpha-gliadin proteins that are specific for the different sub-genomes of wheat. n = number of unique alpha-gliadin protein fragments (UPFs) with the specific motif.