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Table 3 Loci preferentially expressed in 4 or more strains in FeHm-replete conditions

From: Comparison of transcription of the Haemophilus influenzae iron/heme modulon genes in vitro and in vivo in the chinchilla middle ear

   Fold changec
Locusa Descriptionb R2866 10810 Rd R2846 86-028NP
HI0006m Formate dehydrogenase-N, alpha subunit FdnG +7.58 +8.36 not ond +1.44 +1.71
HI0007 Formate dehydrogenase-N, Fe-S beta subunit FdnH +7.49 +6.00 +3.40 +1.21 +1.73
HI0008 Formate dehydrogenase-N, cytochrome B556 gamma subunit, FdnI +7.47 +5.23 +3.20 ns +1.76
HI0009 Formate dehydrogenase-N, accessory protein FdnE +3.35 +3.43 +1.88 ns +1.75
HI0185 Formaldehyde dehydrogenase, glutathione-dependent AdhC +5.86 +4.01 +8.04 +12.18 +2.85
HI0343 Twin-arginine signal-peptide-binding chaperone NapD +3.19 ns +1.66 +1.78 +1.60
HI0344 Periplasmic nitrate reductase subunit NapA +2.67 ns not ond +1.79 +1.62
HI0345 Periplasmic nitrate reductase, ferredoxin-type protein NapG +4.47 ns +1.88 +2.13 +1.91
HI0346 Periplasmic nitrate reductase, ferredoxin-type protein NapH +3.37 +1.25 +1.93 +1.86 +1.71
HI0347 Periplasmic nitrate reductase, electron transfer subunit NapB +4.77 ns +1.90 +1.68 +2.17
HI0348 Periplasmic nitrate reductase, cytochrome C-type subunit NapC +3.20 ns +1.71 +1.69 +2.34
HI0980 DNA architectural protein Fis +4.67 +2.56 +2.06 +1.66 +1.15
HI1066 Nitrite reductase complex, transmembrane protein NrfD +6.34 +2.24 +1.88 +3.84 ns
HI1067 Nitrite reductase complex, Fe-S subunit NrfC +6.99 +1.70 +1.52 +2.98 +3.53
HI1068 Nitrite reductase complex, periplasmic cytochrome subunit NrfB +9.49 ns +2.00 +4.75 +3.81
HI1069 Nitrite reductase complex, periplasmic cytochrome C552 subunit NrfA +8.33 +2.53 +2.13 +5.11 +3.65
HI1078 Probable amino acid ABC transporter, ATP-binding protein +1.88 +1.89 +1.52 +2.21 +1.16
HI1094 Cytochrome c-type biogenesis protein CcmF +2.53 +1.60 +1.81 +1.63 +1.65
HI1384 Ferritin protein A1 +3.21 +2.01 +2.60 +1.62 +2.06
HI1385 Ferritin protein A2 +4.13 +2.24 +2.94 +1.58 +2.23
  1. aGene locus in Rd KW20.
  2. bName and description of the gene based upon annotation of Rd KW20, R2846 and R2866.
  3. c Fold change as determined from the microarray data. Numbers in italics are below the 1.5 fold threshold but have a p-value below the statistically significant threshold. Numbers in bold are above the 1.5 fold threshold but have a p-value above the statistically significant threshold. ns = non significant and below 1.5-fold threshold.
  4. dlocus not included on the Rd KW20 array but expression determined to be above 2 fold change in expression by Q-PCR.