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Table 5 The ncRNA candidates specifically expressed in dermatophytes

From: Identification and characterisation of non-coding small RNAs in the pathogenic filamentous fungus Trichophyton rubrum

   

Genome location

 

Name

Lena

Reads

Chromosome

Start

End

Position

Accession

Trnc_817

188

323

supercont2.1

3719705

3719892

3′UTR

KC353054

Trnc_733

174

1

supercont2.1

3371115

3371288

3′UTR

KC353049

Trnc_2676

156

2

supercont2.4

110438

110593

3′UTR

KC353213

Trnc_3999

178

5

supercont2.8

672734

672557

3′UTR

KC353314

Trnc_1167

177

1

supercont2.11

544895

545071

3′UTR

KC353076

Trnc_2448

161

1

supercont2.3

2123075

2122915

5′UTR

KC353183

Trnc_4219

104

1

supercont2.9

449429

449532

5′UTR

KC353335

Trnc_956

241

2

supercont2.10

559285

559525

5′UTR

KC353063

Trnc_305

97

579

supercont2.1

1515685

1515781

Intron

KC353018

Trnc_500

203

1

supercont2.1

2298649

2298447

Intron

KC353035

Trnc_1792

251

1

supercont2.2

1856556

1856806

Intron

KC353132

  1. Lena: the cDNA length of the ncRNAs; Accession is the accession number in GenBank. This table shows the lengths and genomic loci of ten sncRNAs that might be specifically expressed in dermatophytes. These ncRNAs were conserved in all six dermatophytes but have no homologues in NT.
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