Figure 2
From: Functional chromatin features are associated with structural mutations in cancer
Comparison of the ETSwt/CHD1del (left) and ETS+/CHD1wt (right) subsets of the Prostate-Baca SM callset. A and C. Odds ratio values across all available ChIP-seq experiments. Each point represents a different protein binding ChIP-seq experiment, with odds ratio calculated separately near (≤60 kb) genes (horizontal axis) and far from (>60 kb) genes (vertical axis). Positive values indicate enrichment of protein binding ChIP-seq signal within 50 kb of SM breakpoints. B and D. Cumulative normalized histogram of distance between an SM breakpoint and the nearest gene for the autosomal intrachromosomal events in the SM callsets.