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Table 2 MEBS output: quality of clean reads and mapping results per library

From: Whole genome sequencing and methylome analysis of the wild guinea pig

Library

Clean reads

Mapped reads

Coverage [%]

Sequencing depth

[%]

[x-fold]

MEBS-PE_1

119,880,204

29.5

11.21

9.09

MEBS-PE_2

109,353,416

26.4

9.27

7.54

  1. Clean data and mapped reads were based on Q20 values. Coverage refers to the ‘C. aperea reference sequence’ (including Ns set as 100%). The sequencing depth was calculated per covered region.