From: Target enrichment using parallel nanoliter quantitative PCR amplification
Sample | Capture reaction | PCR replicates | Total variants | Total variants (union) | Variants in comon in between all replicates (intersect) | Genotype concordant | Genotype discordant |
---|---|---|---|---|---|---|---|
Normal1 DNA | Duplicate-A | 2 | 145 | 168 (15 indles) | 120 (10 indels) | 118 (10 indels) | 2 |
Duplicate-B | 2 | 133 | |||||
Singelton-A | 1 | 141 | |||||
Singleton-B | 1 | 143 | |||||
MCF7 | Duplicate-A | 2 | 76 | 86 (16 indels) | 72 (10 indels) | 69 (10 indels) | 3 |
Duplicate-B | 2 | 77 | |||||
Singelton | 1 | 84 | |||||
Normal2 DNA | Singelton-A | 1 | 134 | 149 (14 indels) | 121 (11 indels) | 119 (11 indels) | 2 |
Singleton-B | 1 | 133 |