Figure 5

Putative novel transcript on chromosome 12 detected by Cufflinks. UCSC Genome Browser tracks in vertical order: (A) Chromosomal location. (B) WIG file showing expression levels. (C) BAM file showing mapped RNA-Seq reads (blue bars for forward strand; red for reverse). Segments joined by thin lines represent reads spanning a putative splice junction. (D) Assorted gene and gene prediction tracks showing absence of prior annotations for the novel transcript. (E) ENCODE enhancer- and promoter-associated histone mark H3K4Me1.