Table 2 Novel transcripts detected by Cufflinks/Cuffmerge/CuffDiff pipeline
Name | Location | Fold change (case/control) | Corrected p value | Spliced? | Histone mark? | EST? |
|---|---|---|---|---|---|---|
CUFF.11349 | chr8:101524720-101588587 | -1.88185 | 0.041685 | Yes | Yes | Yes |
CUFF.2472 | chr12:31838565-31853772 | -2.26342 | 0.123977 | Yes | Yes | Yes |
CUFF.3 | chr1:80691-80824 | -11.5273 | 4.46E-08 | No | Yes | Yes |
CUFF.4 | chr1:452495-461228 | -10.6557 | 7.54E-10 | Yes | Yes | Yes |
CUFF.5* | chr1:163653-164729 | -12.5567 | 1.96E-10 | No | No | Yes |
CUFF.6* | chr1:164811-166159 | -12.8975 | 1.27E-12 | No | No | No |
CUFF.7* | chr1:166235-166948 | -12.7567 | 1.27E-12 | Yes | No | Yes |
CUFF.9 | chr1:227665-257075 | -11.1513 | 1.18E-08 | Yes | Yes | Yes |