Skip to main content

Table 1 Localization of putative TgTASL regions

From: Characterization of Toxoplasma gondii subtelomeric-like regions: identification of a long-range compositional bias that is also associated with gene-poor regions

ID

chr

ME49

GT1

VEG

TgTASL_Ia

Ia

1–15692 (15691)

1–22843 (22842)

1–25042 (25042)

TgTASL_II

II

2217257–2260968 (43711)

2241754–2265002 (23248)

2245054–2290271 (45217)

TgTASL_III-a

III 1,2

2446355–2471000 (24645)

70927–103813 (32886)

9692–53051 (43359)

TgTASL_III-b

III

2291623–2321755 (30132)

2287172–2317147 (29975)

2285863–2316508 (30645)

TgTASL_IV

IV

2179605–2207233 (27628)

2212915–2240672 (27757)

2244426–2273211 (28785)

TgTASL_V

V

100060–130829 (30769)

16–29792 (29776)

432280–461875 (29595)

TgTAS-L_VI

VI3

1–2528 (2527) a

3642075–3650379 (8304)

1713506–1741000 (27494)

  

1–6928 (6927) b

  
  

1–7727 (7726) c

  

TgTASL_IX

IX

74193–94753 (20560)

116577–138592 (22015)

72421–100418 (27997)

TgTASL_X-a

X

2008–28943 (26935)

1–26609 (26608)

40642–71653 (31011)

TgTASL_X-b

X

65038–90348 (25310)

59949–85376 (25427)

120781–147164 (26383)

TgTASL_XI

XI

634–27485 (26851)

1–29121 (29120)

1–27453 (27453)

TgTASL_XII

XII

24–16153 (16129)

44111–88494 (44383)

55337–111064 (39762)

  1. Chromosome ranges correspond to the start and end coordinates of each TgTAS-like in the corresponding chromosome.
  2. 1TgTASL_III-a in GT1 strain is present in the scaffold scf_1107000999196.
  3. 2TgTASL_III-a in VEG strain is present in the scaffold scf_1104442825704.
  4. 3TgTASL_VI in ME49 strain can be assembled from the contigs: DS984876 (a), DS984831 (b), and DS984825 (c).
Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us