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Table 2 Partitioning of reads among different organs (leaves, stems, roots) in each species cDNA library ( C. guianensis , E. falcata , S. globulifera and V. surinamensis ) with percentages in parenthesis

From: High-throughput transcriptome sequencing and preliminary functional analysis in four Neotropical tree species

Number of reads

Carapa guianensis

Eperua falcata

Symphonia globulifera

Virola surinamensis

From leaves [MID1]

63016 [43334 (28%)]

17421 [11417 (9%)]

49894 [32190 (30%)]

31526 [22077 (11%)]

From stems [MID2]

47100 [29720 (20%)]

28362 [18088 (14%)]

110373 [66874 (66%)]

41435 [28284 (14%)]

From roots [MID3]

132030 [77052 (50%)]

175551 [100909 (76%)]

7 [2 (0%)]

141948 [89918 (72%)]

Without tag

5999 [3435 (2%)]

3260 [1799 (1%)]

6866 [4367 (4%)]

4314 [2691 (2%)]

  1. Numbers of assembled reads are shown in brackets.